Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4307 domain-containing protein | C5C39_03530 | Not Available | Positive | 737696 - 738160 | 16399.3 |
| transcription elongation factor grea | C5C39_03535 | Not Available | Positive | 738305 - 738796 | 17829.7 |
| threonine ammonia-lyase | C5C39_03540 | Not Available | Negative | 739230 - 740471 | 43166.3 |
| ai-2e family transporter | C5C39_03545 | Not Available | Negative | 740461 - 741651 | 41692.1 |
| spermidine/putrescine abc transporter atp-binding protein | C5C39_03550 | Not Available | Negative | 741704 - 742789 | 37976.6 |
| abc transporter permease | C5C39_03555 | Not Available | Negative | 742786 - 743592 | 28073.5 |
| abc transporter permease | C5C39_03560 | Not Available | Negative | 743589 - 744485 | 30534.0 |
| abc transporter substrate-binding protein | C5C39_03565 | Not Available | Negative | 744482 - 745621 | 38717.1 |
| hypothetical protein | C5C39_03570 | Not Available | Positive | 745782 - 746993 | 45685.7 |
| hypothetical protein | C5C39_03575 | Not Available | Positive | 746990 - 747568 | 19716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
