Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1003 domain-containing protein | C5C39_03225 | Not Available | Positive | 667369 - 667893 | 20139.1 |
| sodium:proton antiporter | C5C39_03230 | Not Available | Positive | 667886 - 669031 | 38924.4 |
| methyltransferase | C5C39_03240 | Not Available | Positive | 669627 - 670259 | 22280.6 |
| duf3117 domain-containing protein | C5C39_03245 | Not Available | Negative | 670328 - 670501 | 5896.22 |
| hypothetical protein | C5C39_03250 | Not Available | Negative | 670589 - 671839 | 46044.9 |
| hypothetical protein | C5C39_03255 | Not Available | Negative | 672046 - 673218 | 42640.8 |
| succinyl-diaminopimelate desuccinylase | C5C39_03260 | Not Available | Negative | 673260 - 674357 | 38923.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C5C39_03265 | Not Available | Positive | 674403 - 675383 | 33878.4 |
| citrate (si)-synthase | C5C39_03270 | Not Available | Negative | 675576 - 676922 | 49836.2 |
| succinyldiaminopimelate transaminase | C5C39_03275 | Not Available | Negative | 677172 - 678281 | 39230.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
