Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | C5C39_02870 | Not Available | Negative | 589750 - 590446 | 22433.3 |
| duf448 domain-containing protein | C5C39_02875 | Not Available | Negative | 590545 - 590868 | 11750.0 |
| transcription elongation factor nusa | C5C39_02880 | Not Available | Negative | 590920 - 591921 | 36011.0 |
| proline--trna ligase | C5C39_02885 | Not Available | Negative | 592112 - 593878 | 63809.7 |
| hypothetical protein | C5C39_02890 | Not Available | Negative | 593932 - 594414 | 16366.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | C5C39_02895 | Not Available | Negative | 594434 - 595603 | 40919.4 |
| peptidase | C5C39_02900 | Not Available | Negative | 595972 - 597348 | 47828.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C5C39_02905 | Not Available | Negative | 597500 - 598582 | 38104.0 |
| peptidylprolyl isomerase | C5C39_02910 | Not Available | Negative | 598620 - 599702 | 36366.6 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C5C39_02915 | Not Available | Positive | 599709 - 601043 | 47354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
