Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | C5C39_02770 | Not Available | Negative | 566720 - 567097 | 13660.4 |
| cca trna nucleotidyltransferase | C5C39_02775 | Not Available | Negative | 567306 - 568730 | 52368.3 |
| hypothetical protein | C5C39_02780 | Not Available | Positive | 568878 - 571097 | 76486.0 |
| murein biosynthesis integral membrane protein murj | C5C39_02785 | Not Available | Positive | 571141 - 572706 | 54915.7 |
| thioredoxin-disulfide reductase | C5C39_02790 | Not Available | Positive | 572918 - 573892 | 34305.3 |
| thioredoxin | C5C39_02795 | Not Available | Positive | 573952 - 574275 | 11653.0 |
| gntr family transcriptional regulator | C5C39_02800 | Not Available | Positive | 574505 - 575809 | 47339.8 |
| d-alanine--d-alanine ligase | C5C39_02805 | Not Available | Positive | 575840 - 576802 | 34173.8 |
| chromosome partitioning protein parb | C5C39_02810 | Not Available | Negative | 578588 - 579556 | 34833.8 |
| chromosome partitioning protein | C5C39_02815 | Not Available | Negative | 579556 - 580533 | 35338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
