Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | C5C39_02720 | Not Available | Positive | 555879 - 557495 | 58835.2 |
| glycosyl hydrolase family 32 | C5C39_02725 | Not Available | Positive | 557570 - 558955 | 49758.7 |
| carbohydrate kinase | C5C39_02730 | Not Available | Positive | 558952 - 559875 | 31394.0 |
| hypothetical protein | C5C39_02735 | Not Available | Negative | 560304 - 561971 | 54622.6 |
| llm class f420-dependent oxidoreductase | C5C39_02740 | Not Available | Negative | 562228 - 563079 | 30548.6 |
| rna-binding protein | C5C39_02745 | Not Available | Negative | 563244 - 563477 | 8015.69 |
| replicative dna helicase | C5C39_02750 | Not Available | Negative | 563479 - 564870 | 50300.0 |
| 50s ribosomal protein l9 | C5C39_02755 | Not Available | Negative | 565316 - 565768 | 16178.5 |
| 30s ribosomal protein s18 | C5C39_02760 | Not Available | Negative | 565777 - 566037 | 9363.56 |
| single-stranded dna-binding protein | C5C39_02765 | Not Available | Negative | 566136 - 566714 | 19682.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
