Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkane 1-monooxygenase | C5C39_02620 | Not Available | Positive | 530992 - 531999 | 35468.8 |
| rna polymerase subunit sigma | C5C39_02625 | Not Available | Positive | 532178 - 532798 | 22957.4 |
| small multidrug efflux protein | C5C39_02630 | Not Available | Negative | 532861 - 533361 | 16845.1 |
| sensor histidine kinase | C5C39_02635 | Not Available | Positive | 533512 - 534690 | 41488.8 |
| dna-binding response regulator | C5C39_02640 | Not Available | Positive | 534687 - 535289 | 21878.3 |
| hypothetical protein | C5C39_02645 | Not Available | Negative | 535344 - 536972 | 59891.8 |
| abc transporter permease | C5C39_02650 | Not Available | Negative | 536969 - 537874 | 32572.5 |
| hypothetical protein | C5C39_02655 | Not Available | Negative | 537871 - 539028 | 42746.5 |
| hypothetical protein | C5C39_02660 | Not Available | Negative | 538796 - 540028 | 43002.5 |
| beta-glucosidase | C5C39_02665 | Not Available | Negative | 540058 - 541431 | 49577.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
