Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit r | C5C39_01860 | Not Available | Positive | 378458 - 379462 | 36182.4 |
| hypothetical protein | C5C39_01865 | Not Available | Negative | 379541 - 379939 | 14970.8 |
| sugar phosphate isomerase | C5C39_01870 | Not Available | Negative | 379949 - 381028 | 40255.5 |
| sugar phosphate isomerase/epimerase | C5C39_01875 | Not Available | Negative | 381072 - 382175 | 40636.0 |
| flagellar biosynthesis protein | C5C39_01880 | Not Available | Negative | 382172 - 382567 | 14361.9 |
| choline dehydrogenase | C5C39_01885 | Not Available | Negative | 382629 - 384155 | 53532.1 |
| hydroxypyruvate isomerase | C5C39_01890 | Not Available | Negative | 384152 - 384949 | 28193.2 |
| polyketide cyclase | C5C39_01895 | Not Available | Negative | 384994 - 385392 | 14667.2 |
| carbohydrate abc transporter permease | C5C39_01900 | Not Available | Negative | 385389 - 386225 | 30431.9 |
| sugar abc transporter permease | C5C39_01905 | Not Available | Negative | 386227 - 387195 | 34704.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
