Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa--3-ketoacid-coa transferase | C5C39_01750 | Not Available | Negative | 354991 - 355785 | 28006.2 |
| hypothetical protein | C5C39_01755 | Not Available | Negative | 355788 - 356969 | 40763.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | C5C39_01760 | Not Available | Negative | 356966 - 358387 | 47990.1 |
| protocatechuate 3,4-dioxygenase subunit alpha | C5C39_01765 | Not Available | Negative | 358380 - 358940 | 19575.2 |
| protocatechuate 3,4-dioxygenase subunit beta | C5C39_01770 | Not Available | Negative | 358933 - 359715 | 28755.3 |
| 4-hydroxybenzoate 3-monooxygenase | C5C39_01775 | Not Available | Negative | 359712 - 360905 | 43267.2 |
| iclr family transcriptional regulator | C5C39_01780 | Not Available | Negative | 361034 - 361798 | 27307.0 |
| acetyl-coa c-acyltransferase | C5C39_01785 | Not Available | Negative | 361803 - 362993 | 39823.3 |
| lysr family transcriptional regulator | C5C39_01795 | Not Available | Positive | 364564 - 365490 | 34581.5 |
| hydroxylase | C5C39_01800 | Not Available | Negative | 365607 - 366590 | 34547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
