Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin/fe(3+)-siderophore abc transporter atp-binding protein | C5C39_15910 | Not Available | Negative | 3355736 - 3356542 | 28674.5 |
| abc transporter permease | C5C39_15915 | Not Available | Negative | 3356539 - 3357597 | 35366.4 |
| iron abc transporter permease | C5C39_15920 | Not Available | Negative | 3357594 - 3358607 | 33601.0 |
| abc transporter substrate-binding protein | C5C39_15925 | Not Available | Negative | 3358604 - 3359609 | 34519.3 |
| aminotransferase | C5C39_15930 | Not Available | Positive | 3359646 - 3360848 | 42946.6 |
| dipeptidase | C5C39_15935 | Not Available | Positive | 3360848 - 3362137 | 44332.8 |
| fad-dependent oxidoreductase | C5C39_15940 | Not Available | Negative | 3362243 - 3363487 | 43190.8 |
| hypothetical protein | C5C39_15945 | Not Available | Negative | 3363573 - 3364778 | 42768.8 |
| succinate dehydrogenase | C5C39_15950 | Not Available | Negative | 3364951 - 3366702 | 62710.9 |
| lysr family transcriptional regulator | C5C39_15955 | Not Available | Positive | 3366773 - 3367726 | 33477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
