Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | C5C39_15560 | Not Available | Positive | 3274103 - 3274639 | 19248.6 |
| abc transporter | C5C39_15565 | Not Available | Positive | 3274645 - 3276351 | 62199.4 |
| lysr family transcriptional regulator | C5C39_15570 | Not Available | Negative | 3276361 - 3277278 | 33236.1 |
| prpf, acnd-accessory | C5C39_15575 | Not Available | Positive | 3277380 - 3278471 | 36833.0 |
| c4-dicarboxylate abc transporter | C5C39_15580 | Not Available | Positive | 3278505 - 3279788 | 44739.4 |
| hydroxyacid dehydrogenase | C5C39_15585 | Not Available | Positive | 3279849 - 3280811 | 33350.8 |
| dna-binding response regulator | C5C39_15590 | Not Available | Positive | 3280907 - 3281584 | 24774.0 |
| two-component sensor histidine kinase | C5C39_15595 | Not Available | Positive | 3281581 - 3282678 | 38398.3 |
| hypothetical protein | C5C39_15600 | Not Available | Positive | 3282714 - 3283325 | 21279.4 |
| merr family transcriptional regulator | C5C39_15605 | Not Available | Negative | 3283449 - 3283808 | 13368.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
