Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C5C39_14950 | Not Available | Positive | 3153372 - 3153617 | 8839.68 |
| pyridoxamine 5'-phosphate oxidase | C5C39_14955 | Not Available | Negative | 3154233 - 3154781 | 19826.5 |
| hypothetical protein | C5C39_14960 | Not Available | Negative | 3154786 - 3155229 | 15915.5 |
| histidine phosphatase family protein | C5C39_14965 | Not Available | Positive | 3155371 - 3156021 | 22140.2 |
| glycine betaine abc transporter atp-binding protein | C5C39_14970 | Not Available | Positive | 3156504 - 3157847 | 47557.2 |
| glycine/betaine abc transporter permease | C5C39_14975 | Not Available | Positive | 3157844 - 3159604 | 61773.5 |
| hypothetical protein | C5C39_14980 | Not Available | Negative | 3159687 - 3160499 | 27301.9 |
| xylulokinase | C5C39_14985 | Not Available | Negative | 3160612 - 3161997 | 47262.5 |
| xylose isomerase | C5C39_14990 | Not Available | Negative | 3162149 - 3163342 | 43427.9 |
| laci family transcriptional regulator | C5C39_14995 | Not Available | Positive | 3163635 - 3164696 | 36887.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
