Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C39_13990 | Not Available | Positive | 2945543 - 2945971 | 15072.5 |
| nad(p)/fad-dependent oxidoreductase | C5C39_13995 | Not Available | Negative | 2945999 - 2947594 | 54833.6 |
| nitrite reductase | C5C39_14000 | Not Available | Negative | 2947587 - 2949674 | 72883.6 |
| mfs transporter | C5C39_14005 | Not Available | Negative | 2949677 - 2951065 | 47967.8 |
| nitrite reductase (nad(p)h) small subunit | C5C39_14010 | Not Available | Negative | 2951150 - 2952208 | 36293.2 |
| nitrite reductase (nad(p)h) | C5C39_14015 | Not Available | Positive | 2952418 - 2955009 | 90969.5 |
| uroporphyrinogen-iii c-methyltransferase | C5C39_14020 | Not Available | Positive | 2955009 - 2956022 | 34943.3 |
| uroporphyrinogen-iii synthase | C5C39_14025 | Not Available | Positive | 2956042 - 2957169 | 39648.6 |
| glycerate kinase | C5C39_14030 | Not Available | Positive | 2957197 - 2958288 | 35572.6 |
| glutaredoxin-like protein nrdh | C5C39_14035 | Not Available | Positive | 2958729 - 2958947 | 7941.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
