Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | C5C39_13740 | Not Available | Negative | 2887749 - 2888189 | 14888.3 |
| ligand-binding protein sh3 | C5C39_13745 | Not Available | Negative | 2888382 - 2888696 | 10735.5 |
| hypothetical protein | C5C39_13750 | Not Available | Negative | 2888855 - 2889193 | 11777.8 |
| amino acid permease | C5C39_13755 | Not Available | Negative | 2889327 - 2890658 | 45690.8 |
| hypothetical protein | C5C39_13760 | Not Available | Negative | 2890889 - 2891089 | 7417.54 |
| nad(p)-dependent dehydrogenase | C5C39_13765 | Not Available | Negative | 2891198 - 2892094 | 31133.7 |
| trna lysidine(34) synthetase tils | C5C39_13770 | Not Available | Negative | 2892363 - 2893355 | 34350.0 |
| inorganic diphosphatase | C5C39_13775 | Not Available | Positive | 2893474 - 2893965 | 18267.5 |
| nlpc/p60 family protein | C5C39_13780 | Not Available | Negative | 2894044 - 2895411 | 47126.5 |
| cell wall-binding protein | C5C39_13785 | Not Available | Negative | 2895485 - 2896876 | 47356.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
