Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | C5C39_13585 | Not Available | Positive | 2849798 - 2850427 | 22533.6 |
| hydroxymethylglutaryl-coa lyase | C5C39_13590 | Not Available | Negative | 2850525 - 2851421 | 30818.7 |
| formyl-coa transferase | C5C39_13595 | Not Available | Negative | 2851442 - 2852731 | 44785.4 |
| hypothetical protein | C5C39_13605 | Not Available | Positive | 2854188 - 2854895 | 23313.5 |
| mfs transporter | C5C39_13610 | Not Available | Negative | 2855017 - 2856570 | 54222.6 |
| hypothetical protein | C5C39_13615 | Not Available | Negative | 2856641 - 2857012 | 13396.7 |
| alpha/beta hydrolase | C5C39_13620 | Not Available | Negative | 2857009 - 2857935 | 32144.6 |
| hypothetical protein | C5C39_13625 | Not Available | Positive | 2857979 - 2858599 | 22813.0 |
| hypothetical protein | C5C39_13630 | Not Available | Negative | 2858690 - 2859217 | 18615.1 |
| transcriptional regulator | C5C39_13635 | Not Available | Positive | 2859477 - 2860478 | 36379.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
