Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | C5C39_12830 | Not Available | Negative | 2684796 - 2686391 | 57155.8 |
| hypothetical protein | C5C39_12835 | Not Available | Negative | 2686591 - 2687151 | 19825.7 |
| hypothetical protein | C5C39_12840 | Not Available | Negative | 2687164 - 2687421 | 9414.28 |
| hypothetical protein | C5C39_12845 | Not Available | Negative | 2687751 - 2688339 | 21359.8 |
| lysr family transcriptional regulator | C5C39_12850 | Not Available | Negative | 2688356 - 2689246 | 31983.4 |
| 1-pyrroline-5-carboxylate dehydrogenase | C5C39_12855 | Not Available | Positive | 2689362 - 2692823 | 121405.0 |
| acyltransferase | C5C39_12860 | Not Available | Positive | 2693125 - 2694258 | 40142.7 |
| hypothetical protein | C5C39_12865 | Not Available | Negative | 2694459 - 2695295 | 30567.6 |
| hypothetical protein | C5C39_12870 | Not Available | Negative | 2695312 - 2697111 | 62291.6 |
| glycosyl transferase | C5C39_12875 | Not Available | Negative | 2697108 - 2698151 | 35873.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
