Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C39_12005 | Not Available | Negative | 2513028 - 2513384 | 12793.7 |
| 3-hydroxyisobutyrate dehydrogenase | C5C39_12010 | Not Available | Negative | 2513574 - 2514461 | 29963.1 |
| hydroxyacid dehydrogenase | C5C39_12015 | Not Available | Positive | 2514503 - 2515609 | 39017.3 |
| iclr family transcriptional regulator | C5C39_12020 | Not Available | Positive | 2515633 - 2516439 | 28282.7 |
| fumarylacetoacetate hydrolase | C5C39_12025 | Not Available | Positive | 2516582 - 2517349 | 26309.5 |
| gluconate 5-dehydrogenase | C5C39_12030 | Not Available | Positive | 2517377 - 2518153 | 27471.8 |
| l-idonate 5-dehydrogenase | C5C39_12035 | Not Available | Positive | 2518185 - 2519225 | 35152.3 |
| atp-dependent rna helicase | C5C39_12040 | Not Available | Positive | 2519318 - 2521153 | 67305.9 |
| abc transporter permease | C5C39_12045 | Not Available | Negative | 2521263 - 2521922 | 23111.3 |
| methionine abc transporter atp-binding protein | C5C39_12050 | Not Available | Negative | 2521919 - 2522935 | 35922.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
