Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | C5C39_11755 | Not Available | Negative | 2464645 - 2465580 | 33774.5 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | C5C39_11760 | Not Available | Negative | 2465577 - 2466209 | 21972.8 |
| zn-dependent hydrolase | C5C39_11765 | Not Available | Negative | 2466206 - 2467456 | 43955.0 |
| ubid family decarboxylase | C5C39_11770 | Not Available | Negative | 2467453 - 2468865 | 49691.5 |
| hypothetical protein | C5C39_11775 | Not Available | Negative | 2468865 - 2470235 | 46671.8 |
| histidine ammonia-lyase | C5C39_11780 | Not Available | Negative | 2470232 - 2471911 | 59409.1 |
| carboxyphosphonoenolpyruvate phosphonomutase | C5C39_11785 | Not Available | Negative | 2472183 - 2473103 | 33046.8 |
| peptide abc transporter substrate-binding protein | C5C39_11790 | Not Available | Negative | 2473135 - 2474775 | 59185.8 |
| asnc family transcriptional regulator | C5C39_11795 | Not Available | Positive | 2474976 - 2475476 | 18167.8 |
| membrane dipeptidase | C5C39_11800 | Not Available | Positive | 2475473 - 2476687 | 42678.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
