Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-shock protein hsp20 | C5C39_01095 | Not Available | Positive | 224255 - 224695 | 15858.7 |
| llm class flavin-dependent oxidoreductase | C5C39_01100 | Not Available | Positive | 224769 - 225725 | 33598.3 |
| nadp-dependent isocitrate dehydrogenase | C5C39_01105 | Not Available | Negative | 225824 - 227041 | 45429.7 |
| gnat family n-acetyltransferase | C5C39_01110 | Not Available | Positive | 227239 - 227688 | 16182.8 |
| dna-binding protein | C5C39_01115 | Not Available | Positive | 227685 - 228008 | 11470.7 |
| abc transporter | C5C39_01120 | Not Available | Negative | 228051 - 229853 | 64671.7 |
| abc transporter | C5C39_01125 | Not Available | Negative | 229850 - 231730 | 67987.4 |
| dimethylarginine dimethylaminohydrolase | C5C39_01130 | Not Available | Negative | 231895 - 233085 | 41455.1 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | C5C39_01135 | Not Available | Negative | 233851 - 235452 | 55542.8 |
| phosphoribosylglycinamide formyltransferase | C5C39_01140 | Not Available | Negative | 235449 - 236042 | 20891.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
