Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | C5C39_10545 | Not Available | Negative | 2214158 - 2214646 | 18153.6 |
| hypothetical protein | C5C39_10550 | Not Available | Positive | 2214712 - 2215446 | 25178.4 |
| Trna-tyr | Not Available | Not Available | Positive | 2215536 - 2215620 | Not Available |
| nad(p)-dependent oxidoreductase | C5C39_10560 | Not Available | Negative | 2215760 - 2216596 | 29244.2 |
| inositol monophosphatase | C5C39_10565 | Not Available | Positive | 2216632 - 2217444 | 27897.8 |
| m23 family peptidase | C5C39_10570 | Not Available | Positive | 2217604 - 2218659 | 36518.8 |
| alpha-amylase | C5C39_10575 | Not Available | Negative | 2218705 - 2220432 | 62924.0 |
| sodium:proton antiporter | C5C39_10580 | Not Available | Negative | 2220675 - 2221121 | 15338.6 |
| sodium:proton antiporter | C5C39_10585 | Not Available | Negative | 2221129 - 2221392 | 9270.69 |
| na+/h+ antiporter subunit e | C5C39_10590 | Not Available | Negative | 2221392 - 2221964 | 21473.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
