Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4229 domain-containing protein | C5C39_10495 | Not Available | Negative | 2202418 - 2202741 | 11804.3 |
| hypothetical protein | C5C39_10500 | Not Available | Positive | 2202828 - 2203199 | 13935.9 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | C5C39_10505 | Not Available | Positive | 2203192 - 2204889 | 60099.6 |
| hypothetical protein | C5C39_10510 | Not Available | Positive | 2205001 - 2206311 | 46346.5 |
| isochorismate synthase | C5C39_10515 | Not Available | Negative | 2206341 - 2207558 | 42687.3 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | C5C39_10520 | Not Available | Positive | 2207798 - 2208514 | 25517.5 |
| geranylgeranyl pyrophosphate synthase | C5C39_10525 | Not Available | Positive | 2208555 - 2209643 | 38853.8 |
| pyridine nucleotide-disulfide oxidoreductase | C5C39_10530 | Not Available | Positive | 2209722 - 2211089 | 50123.5 |
| daunorubicin resistance protein drrc | C5C39_10535 | Not Available | Positive | 2211201 - 2213450 | 79108.9 |
| gdp-mannose pyrophosphatase | C5C39_10540 | Not Available | Negative | 2213478 - 2214131 | 24067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
