Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | C5C39_09255 | Not Available | Negative | 1961587 - 1962615 | 35854.7 |
| competence protein comea | C5C39_09270 | Not Available | Negative | 1965007 - 1965666 | 21784.0 |
| leucine--trna ligase | C5C39_09275 | Not Available | Negative | 1965831 - 1968413 | 96325.9 |
| aminodeoxychorismate synthase, component i | C5C39_09280 | Not Available | Negative | 1968523 - 1969845 | 46389.0 |
| hypothetical protein | C5C39_09285 | Not Available | Positive | 1969904 - 1970632 | 25597.5 |
| s26 family signal peptidase | C5C39_09290 | Not Available | Positive | 1970783 - 1971659 | 30745.4 |
| signal peptidase i | C5C39_09295 | Not Available | Positive | 1971656 - 1972567 | 31345.5 |
| phosphoesterase | C5C39_09300 | Not Available | Positive | 1972614 - 1973348 | 26608.2 |
| hypothetical protein | C5C39_09305 | Not Available | Negative | 1973405 - 1975342 | 65938.6 |
| lytr family transcriptional regulator | C5C39_09310 | Not Available | Positive | 1975794 - 1976912 | 37875.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
