Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminase | C5C39_08900 | Not Available | Negative | 1888649 - 1889209 | 20890.7 |
| lysr family transcriptional regulator | C5C39_08905 | Not Available | Positive | 1889413 - 1889757 | 12156.7 |
| Trna-val | Not Available | Not Available | Positive | 1889782 - 1889857 | Not Available |
| hypothetical protein | C5C39_08915 | Not Available | Positive | 1889938 - 1890633 | 24698.9 |
| peroxiredoxin | C5C39_08920 | Not Available | Negative | 1890661 - 1891134 | 17389.6 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | C5C39_08925 | Not Available | Positive | 1891457 - 1894183 | 101136.0 |
| pucr family transcriptional regulator | C5C39_08930 | Not Available | Positive | 1894195 - 1895472 | 45997.0 |
| acp s-malonyltransferase | C5C39_08935 | Not Available | Positive | 1895595 - 1896518 | 30975.1 |
| 3-oxoacyl-acp synthase | C5C39_08940 | Not Available | Positive | 1896532 - 1897536 | 35076.6 |
| acyl carrier protein | C5C39_08945 | Not Available | Positive | 1897609 - 1897857 | 8937.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
