Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | C5C39_08750 | Not Available | Negative | 1859109 - 1861361 | 83721.9 |
| rhodanese-like domain-containing protein | C5C39_08755 | Not Available | Negative | 1861441 - 1861782 | 11625.6 |
| protein translocase subunit secf | C5C39_08760 | Not Available | Negative | 1861786 - 1862796 | 35498.7 |
| protein translocase subunit secd | C5C39_08765 | Not Available | Negative | 1862796 - 1864520 | 59779.1 |
| preprotein translocase subunit yajc | C5C39_08770 | Not Available | Negative | 1864622 - 1865026 | 14807.7 |
| holliday junction branch migration dna helicase ruvb | C5C39_08775 | Not Available | Negative | 1865115 - 1866149 | 36981.8 |
| holliday junction branch migration protein ruva | C5C39_08780 | Not Available | Negative | 1866146 - 1866751 | 20724.0 |
| crossover junction endodeoxyribonuclease ruvc | C5C39_08785 | Not Available | Negative | 1866748 - 1867350 | 20699.0 |
| yebc/pmpr family dna-binding transcriptional regulator | C5C39_08790 | Not Available | Negative | 1867387 - 1868148 | 27242.8 |
| aminotransferase | C5C39_08795 | Not Available | Negative | 1868407 - 1869594 | 42068.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
