Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | C5C39_08650 | Not Available | Negative | 1840098 - 1841474 | 47813.6 |
| aspartate carbamoyltransferase | C5C39_08655 | Not Available | Negative | 1841474 - 1842430 | 34138.9 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | C5C39_08660 | Not Available | Negative | 1842427 - 1842987 | 20025.1 |
| transcription antitermination factor nusb | C5C39_08665 | Not Available | Negative | 1843144 - 1843563 | 15131.8 |
| elongation factor p | C5C39_08670 | Not Available | Negative | 1843576 - 1844136 | 20330.0 |
| hypothetical protein | C5C39_08675 | Not Available | Positive | 1844363 - 1844650 | 10035.4 |
| 3-dehydroquinate synthase | C5C39_08680 | Not Available | Negative | 1844681 - 1845760 | 38528.4 |
| shikimate kinase | C5C39_08685 | Not Available | Negative | 1845757 - 1846341 | 20640.6 |
| chorismate synthase | C5C39_08690 | Not Available | Negative | 1846367 - 1847584 | 42330.4 |
| shikimate dehydrogenase | C5C39_08695 | Not Available | Negative | 1847607 - 1848578 | 33295.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
