Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxylase | C5C39_07935 | Not Available | Positive | 1687730 - 1690453 | 98533.0 |
| thioredoxin | C5C39_07940 | Not Available | Negative | 1690560 - 1690949 | 13913.4 |
| ntp pyrophosphohydrolase | C5C39_07945 | Not Available | Negative | 1690978 - 1691895 | 32125.9 |
| vanz family protein | C5C39_07950 | Not Available | Positive | 1691959 - 1692411 | 16119.9 |
| aminodeoxychorismate lyase | C5C39_07955 | Not Available | Positive | 1692401 - 1693285 | 30759.6 |
| hypothetical protein | C5C39_07960 | Not Available | Negative | 1693352 - 1693879 | 18074.6 |
| rna-binding protein s4 | C5C39_07965 | Not Available | Positive | 1693966 - 1694331 | 13323.2 |
| llm class f420-dependent oxidoreductase | C5C39_07970 | Not Available | Negative | 1694353 - 1695333 | 35550.8 |
| heat-shock protein | C5C39_07975 | Not Available | Negative | 1695448 - 1696368 | 33116.0 |
| llm class flavin-dependent oxidoreductase | C5C39_07980 | Not Available | Negative | 1696499 - 1697533 | 37589.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
