Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | C5C39_07025 | Not Available | Negative | 1490915 - 1491598 | 24805.6 |
| ribosome maturation factor rimm | C5C39_07030 | Not Available | Negative | 1491595 - 1492323 | 26026.2 |
| kh domain-containing protein | C5C39_07035 | Not Available | Negative | 1492326 - 1492562 | 8337.07 |
| 30s ribosomal protein s16 | C5C39_07040 | Not Available | Negative | 1492566 - 1492976 | 15004.0 |
| glutamate--cysteine ligase | C5C39_07045 | Not Available | Positive | 1493304 - 1494449 | 42428.2 |
| hypothetical protein | C5C39_07050 | Not Available | Positive | 1494446 - 1495219 | 25461.6 |
| llm class f420-dependent oxidoreductase | C5C39_07055 | Not Available | Negative | 1495259 - 1496086 | 30414.8 |
| hypothetical protein | C5C39_07060 | Not Available | Negative | 1496153 - 1496614 | 15355.0 |
| signal recognition particle protein | C5C39_07065 | Not Available | Negative | 1496611 - 1498167 | 55229.7 |
| lipoate--protein ligase b | C5C39_07070 | Not Available | Positive | 1498295 - 1498954 | 23259.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
