Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C39_06620 | Not Available | Negative | 1406492 - 1408234 | 62594.0 |
| hypothetical protein | C5C39_06625 | Not Available | Negative | 1408231 - 1409370 | 39822.4 |
| nad-dependent dna ligase liga | C5C39_06630 | Not Available | Negative | 1409363 - 1411888 | 88494.0 |
| trna 2-thiouridine(34) synthase mnma | C5C39_06635 | Not Available | Negative | 1411885 - 1412988 | 38951.0 |
| cysteine desulfurase nifs | C5C39_06640 | Not Available | Negative | 1413048 - 1414337 | 43477.7 |
| glycogen debranching enzyme glgx | C5C39_06645 | Not Available | Positive | 1414336 - 1416408 | 75646.4 |
| cys-trna(pro) deacylase | C5C39_06650 | Not Available | Positive | 1416408 - 1416890 | 16593.0 |
| duf3417 domain-containing protein | C5C39_06655 | Not Available | Negative | 1417030 - 1419603 | 94022.5 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | C5C39_06660 | Not Available | Positive | 1419828 - 1422044 | 80679.7 |
| 1,4-alpha-glucan branching enzyme | C5C39_06665 | Not Available | Positive | 1422041 - 1424653 | 94942.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
