Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | C5C39_00590 | Not Available | Positive | 129283 - 129732 | 15729.0 |
| hypothetical protein | C5C39_00595 | Not Available | Negative | 130028 - 130234 | 7136.23 |
| hypothetical protein | C5C39_00605 | Not Available | Negative | 134252 - 134635 | 13374.1 |
| hypothetical protein | C5C39_00610 | Not Available | Negative | 134632 - 134961 | 11343.6 |
| bleomycin resistance family protein | C5C39_00615 | Not Available | Negative | 135051 - 135491 | 15966.1 |
| hypothetical protein | C5C39_00620 | Not Available | Negative | 135501 - 136064 | 19147.4 |
| deda family protein | C5C39_00625 | Not Available | Negative | 136162 - 136863 | 24571.6 |
| anti-sigma factor | C5C39_00630 | Not Available | Negative | 136918 - 137643 | 25190.7 |
| rna polymerase subunit sigma | C5C39_00635 | Not Available | Negative | 137640 - 138149 | 18996.7 |
| peptidase m20 | C5C39_00640 | Not Available | Positive | 138303 - 139430 | 39663.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
