Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | C5C39_06470 | Not Available | Positive | 1370491 - 1371312 | 29355.2 |
| methionine--trna ligase | C5C39_06475 | Not Available | Positive | 1371404 - 1372981 | 58778.1 |
| arac family transcriptional regulator | C5C39_06480 | Not Available | Positive | 1373127 - 1374017 | 31912.5 |
| short-chain dehydrogenase | C5C39_06485 | Not Available | Negative | 1374064 - 1374852 | 26451.5 |
| deoxyribonuclease | C5C39_06490 | Not Available | Positive | 1375003 - 1375926 | 33678.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | C5C39_06495 | Not Available | Positive | 1375962 - 1376921 | 33428.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | C5C39_06500 | Not Available | Positive | 1376931 - 1377866 | 32218.2 |
| oxidoreductase | C5C39_06505 | Not Available | Positive | 1377972 - 1379522 | 53415.1 |
| abc transporter atp-binding protein | C5C39_06510 | Not Available | Positive | 1379603 - 1381396 | 65801.5 |
| marr family transcriptional regulator | C5C39_06515 | Not Available | Negative | 1381475 - 1381966 | 18366.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
