Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | C5C39_06265 | Not Available | Positive | 1323288 - 1324031 | 25190.5 |
| abc transporter | C5C39_06270 | Not Available | Negative | 1324147 - 1325961 | 63469.6 |
| mfs transporter | C5C39_06275 | Not Available | Negative | 1326090 - 1327436 | 47398.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | C5C39_06280 | Not Available | Negative | 1327624 - 1328097 | 15706.7 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | C5C39_06285 | Not Available | Negative | 1328100 - 1329422 | 46766.8 |
| riboflavin synthase | C5C39_06290 | Not Available | Negative | 1329419 - 1330045 | 21704.2 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C5C39_06295 | Not Available | Negative | 1330045 - 1331097 | 36186.3 |
| cobalamin biosynthesis protein cobw | C5C39_06300 | Not Available | Negative | 1333046 - 1334089 | 37147.1 |
| 50s ribosomal protein l36 | C5C39_06305 | Not Available | Positive | 1334138 - 1334260 | 4667.89 |
| hypothetical protein | C5C39_06310 | Not Available | Negative | 1334302 - 1334598 | 11008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
