Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | C5C39_05655 | Not Available | Positive | 1193600 - 1194571 | 34557.6 |
| oxidoreductase | C5C39_05660 | Not Available | Positive | 1194702 - 1195769 | 38174.1 |
| cyclase | C5C39_05665 | Not Available | Negative | 1196038 - 1196493 | 17016.7 |
| nitrate reductase | C5C39_05670 | Not Available | Negative | 1196758 - 1198083 | 44830.0 |
| hypothetical protein | C5C39_05675 | Not Available | Positive | 1198175 - 1198711 | 19085.6 |
| sigma-70 family rna polymerase sigma factor | C5C39_05680 | Not Available | Positive | 1198805 - 1199344 | 20001.0 |
| hypothetical protein | C5C39_05685 | Not Available | Positive | 1199341 - 1199931 | 20051.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | C5C39_05690 | Not Available | Positive | 1200097 - 1201629 | 53466.4 |
| aaa family atpase | C5C39_05695 | Not Available | Positive | 1201652 - 1202341 | 24911.5 |
| hypothetical protein | C5C39_05700 | Not Available | Negative | 1202472 - 1203581 | 36822.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
