Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | C5C39_05355 | Not Available | Negative | 1126108 - 1127097 | 34823.9 |
| nucleotide exchange factor grpe | C5C39_05360 | Not Available | Negative | 1127201 - 1127806 | 21064.3 |
| molecular chaperone dnak | C5C39_05365 | Not Available | Negative | 1127809 - 1129671 | 66649.0 |
| mfs transporter | C5C39_05370 | Not Available | Positive | 1129895 - 1131250 | 46947.8 |
| prenyltransferase | C5C39_05375 | Not Available | Negative | 1131310 - 1132176 | 30969.1 |
| lycopene cyclase | C5C39_05380 | Not Available | Negative | 1132173 - 1132481 | 11039.2 |
| lycopene cyclase domain-containing protein | C5C39_05385 | Not Available | Negative | 1132478 - 1132807 | 12326.6 |
| phytoene desaturase | C5C39_05390 | Not Available | Negative | 1132810 - 1135335 | 90560.5 |
| geranylgeranyl pyrophosphate synthase | C5C39_05395 | Not Available | Negative | 1135406 - 1136443 | 36812.6 |
| isopentenyl-diphosphate delta-isomerase | C5C39_05400 | Not Available | Positive | 1136551 - 1137102 | 20050.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
