Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutt | C5C39_05045 | Not Available | Negative | 1061740 - 1062213 | 17470.6 |
| stress responsive protein | C5C39_05050 | Not Available | Negative | 1062213 - 1062695 | 17933.9 |
| hydrogenase expression protein | C5C39_05055 | Not Available | Negative | 1062692 - 1066000 | 111373.0 |
| 1,4-beta-xylanase | C5C39_05060 | Not Available | Negative | 1066100 - 1067305 | 44038.9 |
| hypothetical protein | C5C39_05065 | Not Available | Negative | 1067316 - 1068254 | 34937.7 |
| plp-dependent aminotransferase family protein | C5C39_05070 | Not Available | Negative | 1068292 - 1069728 | 50899.3 |
| hypothetical protein | C5C39_05075 | Not Available | Positive | 1069901 - 1070419 | 17981.9 |
| c4-dicarboxylate transporter dcta | C5C39_05080 | Not Available | Negative | 1070488 - 1071927 | 49808.1 |
| histidine kinase | C5C39_05085 | Not Available | Positive | 1072056 - 1073663 | 56632.7 |
| hypothetical protein | C5C39_05090 | Not Available | Positive | 1073660 - 1074325 | 23409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
