Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | C5C39_00445 | Not Available | Negative | 99701 - 101215 | 55027.7 |
| aquaporin family protein | C5C39_00450 | Not Available | Negative | 101261 - 102019 | 25440.5 |
| fad-dependent oxidoreductase | C5C39_00455 | Not Available | Negative | 102217 - 104088 | 67991.5 |
| transcriptional regulator | C5C39_00460 | Not Available | Positive | 104126 - 105124 | 36124.9 |
| xre family transcriptional regulator | C5C39_00465 | Not Available | Negative | 105207 - 106667 | 53748.8 |
| phosphoenolpyruvate carboxykinase (gtp) | C5C39_00470 | Not Available | Positive | 106911 - 108755 | 67052.6 |
| acyl-coa thioesterase | C5C39_00475 | Not Available | Positive | 108874 - 109839 | 34944.6 |
| type ii 3-dehydroquinate dehydratase | C5C39_00480 | Not Available | Positive | 109836 - 110279 | 15604.6 |
| sam-dependent methyltransferase | C5C39_00485 | Not Available | Positive | 110276 - 111070 | 27738.5 |
| ribonuclease hi | C5C39_00490 | Not Available | Positive | 111165 - 111689 | 18726.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
