Rathayibacter rathayi strain AY1H7 AY1H7_124

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter rathayi strain AY1H7 (accession PSUR00000000.1) is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is an important aspect of its genetic structure. The Gram-positive nature of Rathayibacter rathayi indicates that it has a thick peptidoglycan layer in its cell wall, a feature that can impact its response to environmental stresses and antibiotics. The rod shape may influence its motility and ability to colonize various niches, potentially affecting its ecological interactions. Understanding the genetic and phenotypic attributes of Rathayibacter rathayi strain AY1H7 contributes to the broader knowledge of bacterial diversity and ecology. The unique traits of this strain may provide insights into its role in its specific ecosystem, including its interactions with host plants or other microorganisms. Further studies could elucidate its ecological significance or potential applications in agriculture or biotechnology, particularly if it has symbiotic or pathogenic relationships with plants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter rathayi
Strainstrain AY1H7 AY1H7_124

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter rathayi strain AY1H7 AY1H7_124, whole genome shotgun

Gene Summary

Adenine Count

513288 bp

Thymine Count

510849 bp

Guanine Count

1149971 bp

Cytosine Count

1155699 bp

Genome Length

3330118 bp

Protein-coding Genes

3065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterC5C22_13330Not AvailableNegative2770114 - 277130440076.8
hypothetical proteinC5C22_13335Not AvailableNegative2771301 - 277167812084.7
threonine--trna ligaseC5C22_13340Not AvailablePositive2772022 - 277401074487.0
hit family hydrolaseC5C22_13345Not AvailablePositive2774103 - 277457916978.4
pyridoxal 5'-phosphate synthase lyase subunit pdxsC5C22_13350Not AvailablePositive2774631 - 277554832033.4
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtC5C22_13355Not AvailablePositive2775508 - 277619424025.8
endonuclease viiiC5C22_13360Not AvailablePositive2776256 - 277711630588.2
branched-chain alpha-keto acid dehydrogenase subunit e2C5C22_13365Not AvailablePositive2777165 - 277821136699.0
hypothetical proteinC5C22_13370Not AvailablePositive2778669 - 277898911930.8
alpha-l-arabinofuranosidaseC5C22_13380Not AvailableNegative2779590 - 278112555641.2

Displaying genes 2601 – 2610 of 3117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.