Rathayibacter rathayi strain AY1H7 AY1H7_124

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter rathayi strain AY1H7 (accession PSUR00000000.1) is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is an important aspect of its genetic structure. The Gram-positive nature of Rathayibacter rathayi indicates that it has a thick peptidoglycan layer in its cell wall, a feature that can impact its response to environmental stresses and antibiotics. The rod shape may influence its motility and ability to colonize various niches, potentially affecting its ecological interactions. Understanding the genetic and phenotypic attributes of Rathayibacter rathayi strain AY1H7 contributes to the broader knowledge of bacterial diversity and ecology. The unique traits of this strain may provide insights into its role in its specific ecosystem, including its interactions with host plants or other microorganisms. Further studies could elucidate its ecological significance or potential applications in agriculture or biotechnology, particularly if it has symbiotic or pathogenic relationships with plants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter rathayi
Strainstrain AY1H7 AY1H7_124

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter rathayi strain AY1H7 AY1H7_124, whole genome shotgun

Gene Summary

Adenine Count

513288 bp

Thymine Count

510849 bp

Guanine Count

1149971 bp

Cytosine Count

1155699 bp

Genome Length

3330118 bp

Protein-coding Genes

3065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf305 domain-containing proteinC5C22_11815Not AvailablePositive2472221 - 247289523266.8
hypothetical proteinC5C22_11820Not AvailablePositive2473454 - 24737268657.79
abc transporter atp-binding proteinC5C22_11825Not AvailableNegative2473752 - 247562967572.0
hypothetical proteinC5C22_11830Not AvailableNegative2475855 - 24760828131.63
hypothetical proteinC5C22_11835Not AvailableNegative2476226 - 24764177119.44
carbohydrate abc transporter permeaseC5C22_11840Not AvailableNegative2476705 - 247768835095.2
sugar abc transporter permeaseC5C22_11845Not AvailableNegative2477685 - 247883941399.7
carbohydrate abc transporter substrate-binding proteinC5C22_11850Not AvailableNegative2478961 - 248030446950.3
laci family transcriptional regulatorC5C22_11855Not AvailablePositive2480676 - 248171636463.9
n-acetyltransferaseC5C22_11860Not AvailablePositive2481713 - 248202110813.7

Displaying genes 2311 – 2320 of 3117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.