Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter rathayi |
| Strain | strain AY1H7 AY1H7_124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
513288 bp
Thymine Count
510849 bp
Guanine Count
1149971 bp
Cytosine Count
1155699 bp
Genome Length
3330118 bp
Protein-coding Genes
3065 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C22_11250 | Not Available | Negative | 2349561 - 2349941 | 14358.1 |
| duf948 domain-containing protein | C5C22_11255 | Not Available | Positive | 2350533 - 2350949 | 14004.1 |
| hypothetical protein | C5C22_11260 | Not Available | Positive | 2351047 - 2351238 | 6750.17 |
| alanine--trna ligase | C5C22_11265 | Not Available | Positive | 2351291 - 2353948 | 94992.2 |
| holliday junction resolvase ruvx | C5C22_11270 | Not Available | Positive | 2353949 - 2354533 | 20270.9 |
| endolytic transglycosylase mltg | C5C22_11275 | Not Available | Positive | 2354370 - 2355731 | 48479.7 |
| shikimate dehydrogenase | C5C22_11280 | Not Available | Positive | 2355728 - 2356576 | 29180.0 |
| chorismate synthase | C5C22_11285 | Not Available | Positive | 2356599 - 2357816 | 42598.7 |
| shikimate kinase | C5C22_11290 | Not Available | Positive | 2357842 - 2358426 | 20814.7 |
| 3-dehydroquinate synthase | C5C22_11295 | Not Available | Positive | 2358423 - 2359502 | 38264.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
