Rathayibacter rathayi strain AY1H7 AY1H7_124

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter rathayi strain AY1H7 (accession PSUR00000000.1) is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is an important aspect of its genetic structure. The Gram-positive nature of Rathayibacter rathayi indicates that it has a thick peptidoglycan layer in its cell wall, a feature that can impact its response to environmental stresses and antibiotics. The rod shape may influence its motility and ability to colonize various niches, potentially affecting its ecological interactions. Understanding the genetic and phenotypic attributes of Rathayibacter rathayi strain AY1H7 contributes to the broader knowledge of bacterial diversity and ecology. The unique traits of this strain may provide insights into its role in its specific ecosystem, including its interactions with host plants or other microorganisms. Further studies could elucidate its ecological significance or potential applications in agriculture or biotechnology, particularly if it has symbiotic or pathogenic relationships with plants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter rathayi
Strainstrain AY1H7 AY1H7_124

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter rathayi strain AY1H7 AY1H7_124, whole genome shotgun

Gene Summary

Adenine Count

513288 bp

Thymine Count

510849 bp

Guanine Count

1149971 bp

Cytosine Count

1155699 bp

Genome Length

3330118 bp

Protein-coding Genes

3065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseC5C22_11150Not AvailablePositive2323563 - 232451632835.1
sugar abc transporter substrate-binding proteinC5C22_11155Not AvailablePositive2324634 - 232571336947.2
glycosyl hydrolaseC5C22_11160Not AvailablePositive2325940 - 2329386119907.0
sugar phosphate isomerase/epimeraseC5C22_11165Not AvailablePositive2329495 - 233044834238.3
hypothetical proteinC5C22_11170Not AvailablePositive2330528 - 233179641126.4
hypothetical proteinC5C22_11175Not AvailableNegative2331820 - 233353461432.6
yebc/pmpr family dna-binding transcriptional regulatorC5C22_11180Not AvailablePositive2333523 - 233428427267.8
crossover junction endodeoxyribonuclease ruvcC5C22_11185Not AvailablePositive2334321 - 233494721629.1
holliday junction branch migration protein ruvaC5C22_11190Not AvailablePositive2334944 - 233554920796.2
holliday junction branch migration dna helicase ruvbC5C22_11195Not AvailablePositive2335546 - 233658036913.7

Displaying genes 2181 – 2190 of 3117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.