Rathayibacter rathayi strain AY1H7 AY1H7_124

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter rathayi strain AY1H7 (accession PSUR00000000.1) is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is an important aspect of its genetic structure. The Gram-positive nature of Rathayibacter rathayi indicates that it has a thick peptidoglycan layer in its cell wall, a feature that can impact its response to environmental stresses and antibiotics. The rod shape may influence its motility and ability to colonize various niches, potentially affecting its ecological interactions. Understanding the genetic and phenotypic attributes of Rathayibacter rathayi strain AY1H7 contributes to the broader knowledge of bacterial diversity and ecology. The unique traits of this strain may provide insights into its role in its specific ecosystem, including its interactions with host plants or other microorganisms. Further studies could elucidate its ecological significance or potential applications in agriculture or biotechnology, particularly if it has symbiotic or pathogenic relationships with plants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter rathayi
Strainstrain AY1H7 AY1H7_124

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter rathayi strain AY1H7 AY1H7_124, whole genome shotgun

Gene Summary

Adenine Count

513288 bp

Thymine Count

510849 bp

Guanine Count

1149971 bp

Cytosine Count

1155699 bp

Genome Length

3330118 bp

Protein-coding Genes

3065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aquaporin family proteinC5C22_10640Not AvailablePositive2222837 - 222359525355.3
glycerol kinaseC5C22_10645Not AvailablePositive2223641 - 222515554969.6
tetr family transcriptional regulatorC5C22_10650Not AvailableNegative2225371 - 222611427062.2
tetracycline resistance mfs efflux pumpC5C22_10655Not AvailablePositive2226195 - 222767951282.9
hypothetical proteinC5C22_10660Not AvailableNegative2227987 - 22282659755.81
had family hydrolaseC5C22_10665Not AvailableNegative2228444 - 222926829153.5
tryptophan--trna ligaseC5C22_10670Not AvailableNegative2229183 - 223020837385.3
exodeoxyribonuclease iiiC5C22_10675Not AvailableNegative2230272 - 223110830741.8
pts fructose transporter subunit iibcC5C22_10680Not AvailableNegative2231456 - 223288948579.3
pts fructose transporter subunit iiaC5C22_10690Not AvailableNegative2233270 - 223372215340.3

Displaying genes 2081 – 2090 of 3117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.