Rathayibacter rathayi strain AY1H7 AY1H7_124

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter rathayi strain AY1H7 (accession PSUR00000000.1) is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is an important aspect of its genetic structure. The Gram-positive nature of Rathayibacter rathayi indicates that it has a thick peptidoglycan layer in its cell wall, a feature that can impact its response to environmental stresses and antibiotics. The rod shape may influence its motility and ability to colonize various niches, potentially affecting its ecological interactions. Understanding the genetic and phenotypic attributes of Rathayibacter rathayi strain AY1H7 contributes to the broader knowledge of bacterial diversity and ecology. The unique traits of this strain may provide insights into its role in its specific ecosystem, including its interactions with host plants or other microorganisms. Further studies could elucidate its ecological significance or potential applications in agriculture or biotechnology, particularly if it has symbiotic or pathogenic relationships with plants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter rathayi
Strainstrain AY1H7 AY1H7_124

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter rathayi strain AY1H7 AY1H7_124, whole genome shotgun

Gene Summary

Adenine Count

513288 bp

Thymine Count

510849 bp

Guanine Count

1149971 bp

Cytosine Count

1155699 bp

Genome Length

3330118 bp

Protein-coding Genes

3065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadph-dependent fmn reductaseC5C22_00900Not AvailableNegative187918 - 18854121787.7
llm class flavin-dependent oxidoreductaseC5C22_00905Not AvailableNegative188555 - 18964940687.1
hypothetical proteinC5C22_00910Not AvailablePositive189950 - 19161159974.9
alpha-e domain-containing proteinC5C22_00915Not AvailablePositive191611 - 19254335084.9
transglutaminase family proteinC5C22_00920Not AvailablePositive192540 - 19338831021.4
duf3800 domain-containing proteinC5C22_00925Not AvailablePositive193620 - 19454634873.9
type ii toxin-antitoxin system phd/yefm family antitoxinC5C22_00930Not AvailableNegative194930 - 1951969719.4
mfs transporterC5C22_00935Not AvailableNegative195244 - 19649743838.4
eama family transporterC5C22_00940Not AvailableNegative196698 - 19787340386.8
hypothetical proteinC5C22_00945Not AvailableNegative198225 - 19892326145.9

Displaying genes 181 – 190 of 3117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.