Flavobacterium alvei strain HR-AY HR-AY_22

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium alvei strain HR-AY HR-AY_22 is a rod-shaped bacterium that possesses flagella, facilitating its motility. This strain is characterized by the presence of a single replicon, indicating a streamlined genetic organization. The genomic information for this strain is documented under the accession number PQVG00000000.1. As a member of the Flavobacterium genus, F. alvei is part of a group known for its diverse metabolic capabilities and ecological roles, often found in various aquatic environments. The motility provided by its flagella may enhance its ability to colonize different niches, potentially allowing it to exploit available resources effectively. The presence of a single replicon can be indicative of the organism's evolutionary adaptations, streamlining its genetic processes for survival in its environment. Understanding the genomic characteristics of F. alvei strain HR-AY HR-AY_22 could provide insights into its ecological interactions and adaptability, particularly in environments where competition for resources is prevalent. Overall, the traits of this strain suggest a well-adapted organism that plays a role in its ecosystem through its motility and metabolic versatility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium alvei
Strainstrain HR-AY HR-AY_22

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium alvei strain HR-AY HR-AY_22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium alvei strain HR-AY HR-AY_22, whole genome shotgun

Gene Summary

Adenine Count

1256040 bp

Thymine Count

1252378 bp

Guanine Count

644580 bp

Cytosine Count

670084 bp

Genome Length

3823090 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gliding motility lipoprotein gldkC3L50_02345Not AvailableNegative570248 - 57166053498.0
arginaseC3L50_02350Not AvailableNegative571930 - 57307843561.3
type i dna topoisomeraseC3L50_02355Not AvailableNegative573082 - 57560193983.1
dna-binding response regulatorC3L50_02360Not AvailableNegative575795 - 57649626988.3
histidine kinaseC3L50_02365Not AvailableNegative576486 - 57753541596.2
glucosamine-6-phosphate deaminaseC3L50_02370Not AvailablePositive577875 - 57981273164.9
beta-n-acetylhexosaminidaseC3L50_02375Not AvailablePositive579843 - 58187976926.9
atp-binding proteinC3L50_02380Not AvailableNegative582045 - 58336149712.7
hypothetical proteinC3L50_02385Not AvailableNegative583833 - 58454927826.2
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabC3L50_02390Not AvailablePositive584882 - 58632754680.2

Displaying genes 471 – 480 of 3202 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.