Flavobacterium alvei strain HR-AY HR-AY_22

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium alvei strain HR-AY HR-AY_22 is a rod-shaped bacterium that possesses flagella, facilitating its motility. This strain is characterized by the presence of a single replicon, indicating a streamlined genetic organization. The genomic information for this strain is documented under the accession number PQVG00000000.1. As a member of the Flavobacterium genus, F. alvei is part of a group known for its diverse metabolic capabilities and ecological roles, often found in various aquatic environments. The motility provided by its flagella may enhance its ability to colonize different niches, potentially allowing it to exploit available resources effectively. The presence of a single replicon can be indicative of the organism's evolutionary adaptations, streamlining its genetic processes for survival in its environment. Understanding the genomic characteristics of F. alvei strain HR-AY HR-AY_22 could provide insights into its ecological interactions and adaptability, particularly in environments where competition for resources is prevalent. Overall, the traits of this strain suggest a well-adapted organism that plays a role in its ecosystem through its motility and metabolic versatility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium alvei
Strainstrain HR-AY HR-AY_22

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium alvei strain HR-AY HR-AY_22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium alvei strain HR-AY HR-AY_22, whole genome shotgun

Gene Summary

Adenine Count

1256040 bp

Thymine Count

1252378 bp

Guanine Count

644580 bp

Cytosine Count

670084 bp

Genome Length

3823090 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3467 domain-containing proteinC3L50_12780Not AvailableNegative3051267 - 305157811354.5
dna-directed rna polymerase subunit beta'C3L50_12785Not AvailableNegative3051582 - 3055889159930.0
dna-directed rna polymerase subunit betaC3L50_12790Not AvailableNegative3056094 - 3059906142613.0
50s ribosomal protein l7/l12C3L50_12795Not AvailableNegative3060166 - 306053712708.2
50s ribosomal protein l10C3L50_12800Not AvailableNegative3060659 - 306115917826.4
50s ribosomal protein l1C3L50_12805Not AvailableNegative3061182 - 306187124460.1
50s ribosomal protein l11C3L50_12810Not AvailableNegative3061875 - 306232115595.1
transcription termination/antitermination factor nusgC3L50_12815Not AvailableNegative3062387 - 306293820436.2
preprotein translocase subunit seceC3L50_12820Not AvailableNegative3062949 - 30631467589.2
Trna-trpNot AvailableNot AvailablePositive3063161 - 3063234Not Available

Displaying genes 2531 – 2540 of 3202 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.