Citrobacter freundii strain S1284

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain S1284 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism. This strain does not undergo sporulation, which suggests a reliance on environmental conditions for survival rather than a highly resilient dormant state. C. freundii is commonly found in various habitats, including hospital sewage, intestinal tracts, sewage systems, soil, and surface waters, indicating its versatile adaptability to different environments. As a facultative anaerobe, C. freundii strain S1284 can thrive in both aerobic and anaerobic conditions, allowing it to exploit a range of ecological niches. Its presence in hospital sewage highlights its potential association with anthropogenic environments, where it may play a role in the microbial community dynamics of waste systems. The bacterium's occurrence in diverse habitats, from soil to intestinal tracts, suggests it may contribute to nutrient cycling and organic matter decomposition in these ecosystems. This adaptability and ubiquity may offer insights into the ecological roles of Citrobacter species in biogeochemical processes, particularly in environments impacted by human activity. Further studies on strain S1284 could elucidate its function in microbial communities, especially concerning its interaction with other microorganisms in nutrient-rich or contaminated settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii strain S1284

Accession NumberPQLY00000000.1

Gene Summary

Adenine Count

1319997 bp

Thymine Count

1331153 bp

Guanine Count

1434008 bp

Cytosine Count

1425788 bp

Genome Length

5511103 bp

Protein-coding Genes

4992 genes

Non-Coding Genes

277 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Glycation-binding protein, predicted protease/chaperoneC3433_10485Not Available-2217287 - 221830036133.7
hypotheticalC3433_10490Not Available-2218309 - 22185388190.36
30s ribosomal protein s21C3433_10495Not Available+2218537 - 22187528500.42
Dna primaseC3433_10500Not Available+2219054 - 222079665624.5
Rna polymerase sigma factorC3433_10505Not Available+2220946 - 222279370561.5
G/u mismatch-specific uracil dna glycosylaseC3433_10510Not Available-2222938 - 222344418550.6
Trna,type:met,anti_codon:cat;Not AvailableNot Available+2223570 - 2223645Not Available
AttlNot AvailableNot Available+2223601 - 2223632Not Available
hypothetical proteinC3433_10520Not Available-2223944 - 222450421282.7
hypothetical proteinC3433_10525Not Available-2225035 - 22252899366.45

Displaying genes 1 – 10 of 5269 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites