Citrobacter amalonaticus strain S1285

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter amalonaticus strain S1285 is a Gram-negative, rod-shaped bacterium primarily found in the gut of Homo sapiens. This strain exhibits facultative anaerobic respiration, allowing it to thrive in both oxygen-rich and oxygen-poor environments. The presence of flagella indicates its motility, which may facilitate its interaction with the gut microbiome and contribute to its ecological role. The strain has a single replicon, as evidenced by its genetic makeup, which is cataloged under the accession number PQLX00000000.1. This streamlined genomic structure may play a role in its adaptability and survival within the gut environment, where competition for resources can be intense. Understanding Citrobacter amalonaticus strain S1285 contributes to our knowledge of gut microbiota diversity and its implications for human health. As a member of the gut microbiome, this bacterium may participate in various metabolic processes and interactions that are crucial for maintaining gut health. Its facultative anaerobic nature and motility suggest that it could influence nutrient absorption or interact with other microbial species, thereby impacting the overall balance of gut ecosystems. Further studies could elucidate its specific functions and potential roles in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter amalonaticus
Strainstrain S1285

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter amalonaticus strain S1285
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter amalonaticus strain S1285 scaffold34.1, whole genome

Gene Summary

Adenine Count

1324123 bp

Thymine Count

1307767 bp

Guanine Count

1422538 bp

Cytosine Count

1481614 bp

Genome Length

5536114 bp

Protein-coding Genes

5022 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterC3430_20670Not AvailablePositive4236423 - 423769146995.4
glucuronyl hydrolaseC3430_20675Not AvailablePositive4237715 - 423890545122.4
gntr family transcriptional regulatorC3430_20680Not AvailablePositive4239077 - 424026444196.4
antibiotic biosynthesis monooxygenaseC3430_20685Not AvailableNegative4240318 - 424063211512.0
nadph quinone reductase mdabC3430_20690Not AvailableNegative4240663 - 424124421798.9
two-component system sensor histidine kinase qsecC3430_20695Not AvailableNegative4241353 - 424270250720.3
two-component system response regulator qsebC3430_20700Not AvailableNegative4242699 - 424335824299.5
tigr00156 family proteinC3430_20705Not AvailablePositive4243510 - 424390213935.5
dna topoisomerase iv subunit aC3430_20710Not AvailablePositive4244022 - 424628084013.6
1-acylglycerol-3-phosphate o-acyltransferaseC3430_20715Not AvailablePositive4246462 - 424719927462.9

Displaying genes 4041 – 4050 of 5279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.