Citrobacter amalonaticus strain S1285

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter amalonaticus strain S1285 is a Gram-negative, rod-shaped bacterium primarily found in the gut of Homo sapiens. This strain exhibits facultative anaerobic respiration, allowing it to thrive in both oxygen-rich and oxygen-poor environments. The presence of flagella indicates its motility, which may facilitate its interaction with the gut microbiome and contribute to its ecological role. The strain has a single replicon, as evidenced by its genetic makeup, which is cataloged under the accession number PQLX00000000.1. This streamlined genomic structure may play a role in its adaptability and survival within the gut environment, where competition for resources can be intense. Understanding Citrobacter amalonaticus strain S1285 contributes to our knowledge of gut microbiota diversity and its implications for human health. As a member of the gut microbiome, this bacterium may participate in various metabolic processes and interactions that are crucial for maintaining gut health. Its facultative anaerobic nature and motility suggest that it could influence nutrient absorption or interact with other microbial species, thereby impacting the overall balance of gut ecosystems. Further studies could elucidate its specific functions and potential roles in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter amalonaticus
Strainstrain S1285

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter amalonaticus strain S1285
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter amalonaticus strain S1285 scaffold34.1, whole genome

Gene Summary

Adenine Count

1324123 bp

Thymine Count

1307767 bp

Guanine Count

1422538 bp

Cytosine Count

1481614 bp

Genome Length

5536114 bp

Protein-coding Genes

5022 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione-regulated potassium-efflux system oxidoreductase keffC3430_12960Not AvailableNegative2649162 - 264969220125.2
ygdi/ygdr family lipoproteinC3430_12965Not AvailableNegative2649975 - 26502088331.77
mfs transporterC3430_12970Not AvailableNegative2650451 - 265178248939.4
ferredoxin-like protein fixxC3430_12975Not AvailableNegative2651891 - 265217810612.7
fad-dependent oxidoreductaseC3430_12980Not AvailableNegative2652175 - 265346145498.4
nitrogen fixation protein fixbC3430_12985Not AvailableNegative2653536 - 265447733660.2
electron transfer flavoproteinC3430_12990Not AvailableNegative2654493 - 265526327155.5
l-carnitine/gamma-butyrobetaine antiporterC3430_12995Not AvailablePositive2655734 - 265725156664.6
crotonobetainyl-coa dehydrogenaseC3430_13000Not AvailablePositive2657284 - 265842642496.7
l-carnitine coa-transferaseC3430_13005Not AvailablePositive2658540 - 265975744979.2

Displaying genes 2621 – 2630 of 5279 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.