Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter amalonaticus |
| Strain | strain S1285 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1324123 bp
Thymine Count
1307767 bp
Guanine Count
1422538 bp
Cytosine Count
1481614 bp
Genome Length
5536114 bp
Protein-coding Genes
5022 genes
Non-Coding Genes
257 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence effector srfc | C3430_00220 | Not Available | Positive | 44740 - 46884 | 79777.9 |
| hypothetical protein | C3430_00230 | Not Available | Positive | 47907 - 48113 | 7957.18 |
| type iv secretion protein rhs | C3430_00235 | Not Available | Positive | 48231 - 48794 | 21825.1 |
| hypothetical protein | C3430_00240 | Not Available | Positive | 48791 - 49117 | 12197.6 |
| type vi secretion system tube protein hcp | C3430_00245 | Not Available | Positive | 49119 - 49622 | 18663.4 |
| hypothetical protein | C3430_00250 | Not Available | Positive | 49845 - 50042 | 7379.94 |
| hypothetical protein | C3430_00255 | Not Available | Negative | 50161 - 50394 | 9051.51 |
| stress response membrane protein yncl | C3430_00260 | Not Available | Positive | 50525 - 50620 | 3390.3 |
| aminobutyraldehyde dehydrogenase | C3430_00265 | Not Available | Negative | 50720 - 52144 | 50951.0 |
| gntr family transcriptional regulator | C3430_00270 | Not Available | Negative | 52500 - 53909 | 52884.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

