Citrobacter amalonaticus strain S1285

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter amalonaticus strain S1285 is a Gram-negative bacterium that resides in the gut, exhibiting facultative anaerobic growth characteristics. This strain is part of the diverse genus Citrobacter, which is known for its metabolic versatility and ability to thrive in varying oxygen environments. As a facultative anaerobe, C. amalonaticus strain S1285 can utilize oxygen for respiration when available, but is also capable of fermentative metabolism in its absence, allowing it to adapt to fluctuating conditions within the gut microbiome. The habitat of the gut provides a complex ecosystem where C. amalonaticus strain S1285 likely plays a role in the digestion of nutrients and the maintenance of gut health, although specific functional contributions of this strain remain to be elucidated. Its presence in the gut microbiota may influence the metabolic processes of other microorganisms, contributing to a balanced microbial community. Due to its Gram-negative cell wall structure, C. amalonaticus strain S1285 may possess unique surface characteristics that facilitate interactions with the gut environment, including potential roles in nutrient absorption and modulation of host immune responses. Understanding the specific interactions and functions of C. amalonaticus strain S1285 within the gut ecosystem could provide insights into its contributions to gut health and overall host physiology. Further research could elucidate the strain's metabolic pathways and its potential impact on gut microbial dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter amalonaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter amalonaticus strain S1285


Gene Summary

Adenine Count

1324123 bp

Thymine Count

1307767 bp

Guanine Count

1422538 bp

Cytosine Count

1481614 bp

Genome Length

5536114 bp

Protein-coding Genes

5022 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase atpase subunitC3430_20280Not Available-4167164 - 416893366379.9
Capsid scaffolding proteinC3430_20285Not Available+4169099 - 416995331377.9
P2 family major capsid proteinC3430_20290Not Available+4170030 - 417109739681.0
R proteinC3430_20295Not Available+4171101 - 417185327855.8
Phage head proteinC3430_20300Not Available+4171942 - 417244818848.5
Tail completion proteinC3430_20305Not Available+4172448 - 41726517283.7
HolinC3430_20310Not Available+4172655 - 417295110277.0
LysinC3430_20315Not Available+4172938 - 417343518581.2
Orf27C3430_20320Not Available+4173432 - 417384515188.3
Gp12C3430_20325Not Available+4173817 - 41739906098.23

Displaying genes 131 – 140 of 5279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites