Pseudonocardia alni strain DSM 44104

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia alni strain DSM 44104 is a rod-shaped bacterium characterized as a mesophilic organism with an optimal growth temperature of 29°C. This temperature preference indicates its ability to thrive in moderate environmental conditions. The strain possesses a single replicon, which is typical for many bacteria, suggesting a streamlined genetic structure that may contribute to its adaptability. One notable feature of Pseudonocardia alni is its ability to form spores. Sporulation is a critical survival mechanism that allows the bacterium to endure unfavorable conditions, ensuring its persistence in various environments. This trait is particularly relevant in ecological contexts where nutrient availability and environmental stressors may fluctuate. The strain is cataloged under the accession number PHUJ00000000.1, which provides a reference for further genomic studies and classification within microbial databases. As part of the Pseudonocardia genus, this strain may play a role in soil ecosystems, particularly in the degradation of organic materials and the cycling of nutrients. In summary, Pseudonocardia alni strain DSM 44104 exhibits key traits such as rod shape, mesophilic temperature preferences, and spore-forming capabilities, which together suggest its ecological significance in soil microbiomes. Understanding its characteristics can provide insights into its role in environmental processes and the potential benefits it may offer in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia alni
Strainstrain DSM 44104

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia alni strain DSM 44104 Ga0074759_13, whole genome

Gene Summary

Adenine Count

776957 bp

Thymine Count

771737 bp

Guanine Count

2220336 bp

Cytosine Count

2225777 bp

Genome Length

5994807 bp

Protein-coding Genes

5468 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xaa-pro aminopeptidaseATL51_0906Not AvailablePositive991038 - 99216539679.9
phage shock protein c (pspc) family proteinATL51_0907Not AvailablePositive992275 - 9924757335.43
lmbe family n-acetylglucosaminyl deacetylaseATL51_0908Not AvailablePositive992743 - 99354927485.7
dolichol-phosphate mannosyltransferaseATL51_0909Not AvailablePositive993751 - 99452727737.9
uncharacterized protein (duf885 family)ATL51_0910Not AvailableNegative994552 - 99630363281.1
rna polymerase binding protein rbpaATL51_0911Not AvailableNegative996409 - 99675013063.3
umf1 family mfs transporterATL51_0912Not AvailableNegative996992 - 99831746002.7
glycerophosphoryl diester phosphodiesteraseATL51_0913Not AvailableNegative998381 - 99914827418.8
bifunctional non-homologous end joining protein ligdATL51_0914Not AvailableNegative999154 - 100111271782.6
protein of unknown function (duf3072)ATL51_0915Not AvailablePositive1001226 - 10014538077.04

Displaying genes 881 – 890 of 5536 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.