Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_08915 | Not Available | Positive | 1856878 - 1857162 | 10894.0 |
| hypothetical protein | CSX02_08920 | Not Available | Positive | 1857166 - 1857597 | 16660.2 |
| Gp60 | CSX02_08925 | Not Available | Positive | 1857718 - 1858083 | 13924.6 |
| Hypothetical protein | CSX02_08930 | Not Available | Positive | 1858193 - 1858663 | 17255.5 |
| Terminase large subunit | CSX02_08935 | Not Available | Positive | 1858723 - 1860288 | 59012.5 |
| Gp4, phage portal protein, hk97 family | CSX02_08940 | Not Available | Positive | 1860306 - 1861646 | 50281.5 |
| Putative clp peptidase | CSX02_08945 | Not Available | Positive | 1861579 - 1862355 | 28457.0 |
| Major capsid protein precursor | CSX02_08950 | Not Available | Positive | 1862370 - 1863551 | 43058.7 |
| hypothetical | CSX02_08955 | Not Available | Positive | 1863615 - 1863812 | 7049.34 |
| Putative dna packaging protein | CSX02_08960 | Not Available | Positive | 1864316 - 1864591 | 10543.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

