Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna polymerase i | CSX02_08870 | Not Available | Negative | 1847805 - 1849787 | 74627.2 |
| hypothetical protein | CSX02_08875 | Not Available | Negative | 1849847 - 1850062 | 8461.47 |
| Hypothetical protein | CSX02_08880 | Not Available | Negative | 1850136 - 1850705 | 20259.6 |
| Hypothetical protein | CSX02_08885 | Not Available | Negative | 1850719 - 1851840 | 41449.8 |
| hypothetical protein | CSX02_08890 | Not Available | Negative | 1851833 - 1852198 | 12958.2 |
| Attl | Not Available | Not Available | Positive | 1852577 - 1852589 | Not Available |
| Dna primase | CSX02_08895 | Not Available | Positive | 1852601 - 1854874 | 85528.8 |
| Hypothetical protein | CSX02_08900 | Not Available | Positive | 1855063 - 1855272 | 8062.57 |
| Hydrolase | CSX02_08905 | Not Available | Positive | 1855253 - 1855534 | 10516.1 |
| Dna helicase | CSX02_08910 | Not Available | Positive | 1855515 - 1856891 | 51451.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

